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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
BLCA cis rs9815354 1 rs9826058 chr3:41762062 ULK4 chr3:41288091-42003660:- 0.64 9.9 9.78E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs9826496 chr3:134224437 ANAPC13 chr3:134196547-134204865:- 0.47 7.38 9.98E-13 Height
BLCA cis rs10935120 1 rs9826496 chr3:134224437 CEP63 chr3:134204575-134293852:+ 0.23 3.87 0.000127 Height
BLCA cis rs10935120 1 rs9827987 chr3:134272621 ANAPC13 chr3:134196547-134204865:- 0.5 7.97 1.89E-14 Height
BLCA cis rs10935120 1 rs9827987 chr3:134272621 CEP63 chr3:134204575-134293852:+ 0.24 4.09 5.33E-5 Height
BLCA cis rs9815354 1 rs9828398 chr3:41895893 ULK4 chr3:41288091-42003660:- 0.64 9.91 9.53E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs9828815 chr3:134265749 ANAPC13 chr3:134196547-134204865:- 0.49 7.7 1.15E-13 Height
BLCA cis rs10935120 1 rs9828815 chr3:134265749 CEP63 chr3:134204575-134293852:+ 0.23 3.93 0.000102 Height
BLCA cis rs10935120 1 rs9829092 chr3:134229866 ANAPC13 chr3:134196547-134204865:- 0.51 8.27 2.3E-15 Height
BLCA cis rs10935120 1 rs9829092 chr3:134229866 CEP63 chr3:134204575-134293852:+ 0.26 4.64 4.9E-6 Height
BLCA cis rs9815354 1 rs9830064 chr3:41881801 ULK4 chr3:41288091-42003660:- 0.64 9.86 1.41E-20 Diastolic blood pressure
BLCA cis rs9815354 1 rs9830469 chr3:41762535 ULK4 chr3:41288091-42003660:- 0.64 9.9 9.78E-21 Diastolic blood pressure
BLCA cis rs10935120 1 rs9832785 chr3:134213070 ANAPC13 chr3:134196547-134204865:- 0.5 8.02 1.28E-14 Height
BLCA cis rs10935120 1 rs9832785 chr3:134213070 CEP63 chr3:134204575-134293852:+ 0.25 4.35 1.77E-5 Height
BLCA cis rs9815354 1 rs9834098 chr3:41833493 ULK4 chr3:41288091-42003660:- 0.63 9.79 2.36E-20 Diastolic blood pressure